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    transmembrane/coiled-coil protein (DUF726) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816322, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transmembrane/coiled-coil protein (DUF726)
    Primary source
    TAIR:AT2G18100
    Locus tag
    AT2G18100
    See related
    Araport:AT2G18100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T27K22.3; T27K22_3
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    15
    Sequence:
    Chromosome: 2; NC_003071.7 (7867828..7871801)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein Neighboring gene Translation elongation factor EF1B/ribosomal protein S6 family protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001335582.1
    NM_001335583.1
    NM_001335584.1
    NM_127366.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane/coiled-coil protein (DUF726)
    NP_179401.2
    • Protein of unknown function (DUF726); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT4G36210.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7867828..7871801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127366.4 → NP_179401.2  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179401.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WZ81, F4IPL5
      Conserved Domains (1) summary
      cl21494
      Location:297 → 646
      Abhydrolase; alpha/beta hydrolases

    2. NM_001335582.1 → NP_001323554.1  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1G7, A0A1P8AXD2, A0A5S9WZ81

    3. NM_001335583.1 → NP_001323553.1  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXD9

    4. NM_001335584.1 → NP_001323552.1  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1G7, A0A1P8AXI8, A0A5S9WZ81
    Nucleotide Protein
    Heading Accession and Version

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