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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838881, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G22750
    Locus tag
    AT1G22750
    See related
    Araport:AT1G22750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T22J18.8; T22J18_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (8050770..8052930)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene MA3 domain-containing protein Neighboring gene RAB GTPase homolog G3B Neighboring gene poly(A) binding protein 3 Neighboring gene gigantea protein (GI)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001036003.2
    NM_001084112.2
    NM_102122.4
    NM_179368.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001031080.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001077581.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 186 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
    NP_564179.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
    NP_849699.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8050770..8052930
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102122.4 → NP_564179.1  uncharacterized protein AT1G22750 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564179.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DXG5, Q949W5
      Conserved Domains (1) summary
      pfam07343
      Location:1 → 242
      DUF1475; Protein of unknown function (DUF1475)

    2. NM_001084112.2 → NP_001077581.1  uncharacterized protein AT1G22750 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077581.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9VK22, A0A654EC38, O64379
      Conserved Domains (1) summary
      pfam07343
      Location:1 → 242
      DUF1475; Protein of unknown function (DUF1475)

    3. NM_179368.2 → NP_849699.1  uncharacterized protein AT1G22750 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849699.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DXG5, Q7DLS5
      Conserved Domains (1) summary
      pfam07343
      Location:1 → 242
      DUF1475; Protein of unknown function (DUF1475)

    4. NM_001036003.2 → NP_001031080.1  uncharacterized protein AT1G22750 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031080.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DXG5, F4I2Z8
      Conserved Domains (1) summary
      pfam07343
      Location:1 → 241
      DUF1475; Protein of unknown function (DUF1475)
    Nucleotide Protein
    Heading Accession and Version

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