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    FRS8 FAR1-related sequence 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844341, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FRS8
    Official Full Name
    FAR1-related sequence 8
    Primary source
    TAIR:AT1G80010
    Locus tag
    AT1G80010
    See related
    Araport:AT1G80010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18B13.10; F18B13_10; FAR1-related sequence 8
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    Genomic context

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    See FRS8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (30097336..30100045)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene coatomer subunit beta-2 Neighboring gene ncRNA Neighboring gene CASC3/Barentsz eIF4AIII binding protein Neighboring gene pseudo Neighboring gene Molecular chaperone Hsp40/DnaJ family protein Neighboring gene ubiquitin system component Cue

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_106650.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    FAR1-related sequence 8
    NP_178118.2
    • FAR1-related sequence 8 (FRS8); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 6 (TAIR:AT1G52520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      30097336..30100045
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106650.3 → NP_178118.2  FAR1-related sequence 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178118.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S793
      UniProtKB/TrEMBL
      A0A178W116, A0A654F1G1
      Conserved Domains (1) summary
      PLN03097
      Location:95 → 715
      FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9S793.2

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