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    alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837351, updated on 18-Sep-2024

    Summary

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    Official Full Name
    alpha/beta-Hydrolases superfamily protein
    Primary source
    TAIR:AT1G08310
    Locus tag
    AT1G08310
    See related
    Araport:AT1G08310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T23G18.18; T23G18_18
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (2618647..2620452)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Glycosyltransferase family 29 (sialyltransferase) family protein Neighboring gene WIP domain protein 3 Neighboring gene no vein-like protein Neighboring gene ARM repeat superfamily protein Neighboring gene ncRNA Neighboring gene bZIP transcription factor family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084019.1
    NM_001331768.1
    NM_100704.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alpha/beta-Hydrolases superfamily protein
    NP_001077488.1
    • alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G44510.2); Has 1176 Blast hits to 1175 proteins in 318 species: Archae - 2; Bacteria - 667; Metazoa - 58; Fungi - 41; Plants - 314; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
    NP_172308.2
    • alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G44510.2); Has 1160 Blast hits to 1159 proteins in 335 species: Archae - 4; Bacteria - 652; Metazoa - 57; Fungi - 49; Plants - 320; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2618647..2620452
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084019.1 → NP_001077488.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077488.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ED16, A8MRK8
      Conserved Domains (2) summary
      COG0596
      Location:14 → 305
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      pfam12695
      Location:35 → 139
      Abhydrolase_5; Alpha/beta hydrolase family

    2. NM_100704.5 → NP_172308.2  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172308.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ED16, B3H6Y0
      Conserved Domains (2) summary
      COG0596
      Location:14 → 302
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      pfam12695
      Location:35 → 136
      Abhydrolase_5; Alpha/beta hydrolase family

    3. NM_001331768.1 → NP_001323356.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WFH1, A0A1P8AWS9
    Nucleotide Protein
    Heading Accession and Version

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