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    transferases, transferring glycosyl groups [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844163, updated on 18-Sep-2024

    Summary

    Official Full Name
    transferases, transferring glycosyl groups
    Primary source
    TAIR:AT1G78280
    Locus tag
    AT1G78280
    See related
    Araport:AT1G78280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3F9.18; F3F9_18
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    16
    Sequence:
    Chromosome: 1; NC_003070.9 (29452555..29457373)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ncRNA Neighboring gene UDP-glucosyl transferase 85A4 Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene general regulatory factor 2

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_106477.7

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    transferases, transferring glycosyl groups
    NP_177951.6
    • transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29452555..29457373
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106477.7NP_177951.6  transferases, transferring glycosyl groups [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177951.6

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M9E8
      UniProtKB/TrEMBL
      A0A178WKI0, A0A5S9WVF0, A0A654EQ23
      Conserved Domains (3) summary
      pfam01636
      Location:669877
      APH; Phosphotransferase enzyme family
      pfam12937
      Location:1761
      F-box-like
      cl40423
      Location:137362
      cupin_RmlC-like; RmlC-like cupin superfamily