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    GA20OX4 gibberellin 20-oxidase 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842389, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GA20OX4
    Official Full Name
    gibberellin 20-oxidase 4
    Primary source
    TAIR:AT1G60980
    Locus tag
    AT1G60980
    See related
    Araport:AT1G60980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGA20OX4; gibberellin 20-oxidase 4; T7P1.12; T7P1_12
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    Genomic context

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    See GA20OX4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (22452573..22454140)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene iron regulated transporter 3 Neighboring gene SNARE-like superfamily protein Neighboring gene SCR-like 8 Neighboring gene SCR-like 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis life cycle. Rieu I, et al. Plant J, 2008 Feb. PMID 18069939
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables gibberellin 20-oxidase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gibberellin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within gibberellin biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    gibberellin 20-oxidase 4
    NP_176294.1
    • gibberellin 20-oxidase 4 (GA20OX4); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20-oxidase 3 (TAIR:AT5G07200.1); Has 8571 Blast hits to 8544 proteins in 996 species: Archae - 0; Bacteria - 1139; Metazoa - 118; Fungi - 1037; Plants - 4879; Viruses - 0; Other Eukaryotes - 1398 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22452573..22454140
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104778.1 → NP_176294.1  gibberellin 20-oxidase 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176294.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C955
      UniProtKB/TrEMBL
      A0A5S9WNM5
      Conserved Domains (1) summary
      PLN02276
      Location:16 → 376
      PLN02276; gibberellin 20-oxidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C955.1

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