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    Methionine sulfoxide reductase (MSS4-like) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819719, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Methionine sulfoxide reductase (MSS4-like) family protein
    Primary source
    TAIR:AT3G05540
    Locus tag
    AT3G05540
    See related
    Araport:AT3G05540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18C1.20; F18C1_20
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (1606487..1608030, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Subunits of heterodimeric actin filament capping protein Capz superfamily Neighboring gene tRNA-Glu Neighboring gene regulatory particle triple-A ATPase 5A Neighboring gene RING/U-box superfamily protein Neighboring gene Hypoxia-responsive family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtTCTP2, an Arabidopsis thaliana homolog of Translationally Controlled Tumor Protein, enhances in vitro plant regeneration. Toscano-Morales R, et al. Front Plant Sci, 2015. PMID 26191065, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within developmental process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of cell population proliferation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Methionine sulfoxide reductase (MSS4-like) family protein
    NP_187205.4
    • Methionine sulfoxide reductase (MSS4-like) family protein; CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105), Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323), Translationally controlled tumour protein, conserved site (InterPro:IPR018103), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: translationally controlled tumor protein (TAIR:AT3G16640.1); Has 857 Blast hits to 857 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 450; Fungi - 152; Plants - 156; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1606487..1608030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111427.4 → NP_187205.4  Methionine sulfoxide reductase (MSS4-like) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187205.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X9G0
      Conserved Domains (1) summary
      pfam00838
      Location:1 → 163
      TCTP; Translationally controlled tumour protein
    Nucleotide Protein
    Heading Accession and Version

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