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    MEE18 maternal effect embryo arrest 18 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817970, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MEE18
    Official Full Name
    maternal effect embryo arrest 18
    Primary source
    TAIR:AT2G34090
    Locus tag
    AT2G34090
    See related
    Araport:AT2G34090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    maternal effect embryo arrest 18; T14G11.21; T14G11_21
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    Genomic context

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    See MEE18 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Sequence:
    Chromosome: 2; NC_003071.7 (14396016..14399275, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene TRICHOME BIREFRINGENCE-LIKE 37 Neighboring gene uncharacterized protein Neighboring gene Cysteine proteinases superfamily protein Neighboring gene ncRNA Neighboring gene nonsense-mediated mRNA decay-like protein Neighboring gene Cytochrome C oxidase polypeptide VIB family protein Neighboring gene Cysteine-rich protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A collection of Ds insertional mutants associated with defects in male gametophyte development and function in Arabidopsis thaliana. Boavida LC, et al. Genetics, 2009 Apr. PMID 19237690, Free PMC Article
    2. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
    3. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Pagnussat GC, et al. Development, 2005 Feb. PMID 15634699
    4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001202741.2
    NM_001336484.1
    NM_001336485.1
    NM_128960.3
    NM_201866.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables LPPG:FO 2-phospho-L-lactate transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    maternal effect embryo arrest 18
    NP_001189670.2
    • maternal effect embryo arrest 18 (MEE18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 (InterPro:IPR002882).
    NP_180956.2
    • maternal effect embryo arrest 18 (MEE18); CONTAINS InterPro DOMAIN/s: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 (InterPro:IPR002882); Has 2113 Blast hits to 1989 proteins in 935 species: Archae - 0; Bacteria - 1707; Metazoa - 0; Fungi - 155; Plants - 41; Viruses - 1; Other Eukaryotes - 209 (source: NCBI BLink).
    NP_973595.1
    • maternal effect embryo arrest 18 (MEE18); CONTAINS InterPro DOMAIN/s: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 (InterPro:IPR002882); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14396016..14399275 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128960.3 → NP_180956.2  maternal effect embryo arrest 18 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180956.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VVH0, A0A7G2EB52, Q8H0T0
      Conserved Domains (1) summary
      cd07187
      Location:54 → 440
      YvcK_like; family of mostly uncharacterized proteins similar to B.subtilis YvcK

    2. NM_201866.2 → NP_973595.1  maternal effect embryo arrest 18 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973595.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IGV3, O22962
      Conserved Domains (1) summary
      cd07187
      Location:54 → 466
      YvcK_like; family of mostly uncharacterized proteins similar to B.subtilis YvcK

    3. NM_001336484.1 → NP_001323468.1  maternal effect embryo arrest 18 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AX45, O22962

    4. NM_001202741.2 → NP_001189670.2  maternal effect embryo arrest 18 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EB52, F4IGV4

    5. NM_001336485.1 → NP_001323467.1  maternal effect embryo arrest 18 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXA5, O22962
    Nucleotide Protein
    Heading Accession and Version

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