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    OPT7 oligopeptide transporter 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826672, updated on 18-Sep-2024

    Summary

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    Official Symbol
    OPT7
    Official Full Name
    oligopeptide transporter 7
    Primary source
    TAIR:AT4G10770
    Locus tag
    AT4G10770
    See related
    Araport:AT4G10770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 7; ATOPT7; oligopeptide transporter 7; T12H20.7; T12H20_7
    Summary
    oligopeptide transporter
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    Genomic context

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    See OPT7 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (6628398..6632676, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Phosphoenolpyruvate carboxylase family protein Neighboring gene ncRNA Neighboring gene mRNAadenosine methylase Neighboring gene SCR-like 21 Neighboring gene LRR and NB-ARC domains-containing disease resistance protein Neighboring gene UBX domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An oligopeptide transporter gene family in Arabidopsis. Koh S, et al. Plant Physiol, 2002 Jan. PMID 11788749, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001340684.1
    NM_117145.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables oligopeptide transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oligopeptide transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables oligopeptide transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within oligopeptide transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    oligopeptide transporter 7
    NP_192815.1
    • oligopeptide transporter 7 (OPT7); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 1 (TAIR:AT4G27730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      6628398..6632676 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117145.3 → NP_192815.1  oligopeptide transporter 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192815.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82485
      UniProtKB/TrEMBL
      A0A654FN28
      Conserved Domains (1) summary
      TIGR00728
      Location:59 → 731
      OPT_sfam; oligopeptide transporter, OPT superfamily

    2. NM_001340684.1 → NP_001328829.1  oligopeptide transporter 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B5U9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O82485.1

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