U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GSNAP gamma-soluble NSF attachment protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827789, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    GSNAP
    Official Full Name
    gamma-soluble NSF attachment protein
    Primary source
    TAIR:AT4G20410
    Locus tag
    AT4G20410
    See related
    Araport:AT4G20410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9F13.60; F9F13_60; GAMMA-SNAP; gamma-soluble NSF attachment protein; GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN
    Summary
    Encodes a member of the gamma-soluble NSF attachment protein (gSNAP) gene family.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GSNAP in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (11013839..11016590, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene PEBP (phosphatidylethanolamine-binding protein) family protein Neighboring gene LSD1 zinc finger family protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene JUMONJI 14 Neighboring gene Subtilase family protein Neighboring gene Tapetum specific protein TAP35/TAP44 Neighboring gene small nuclear ribonucleoprotein associated protein B

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help
    NM_001341437.1
    NM_118160.5

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    gamma-soluble NSF attachment protein
    NP_567600.1
    • gamma-soluble NSF attachment protein (GSNAP); FUNCTIONS IN: transporter activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11013839..11016590 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118160.5 → NP_567600.1  gamma-soluble NSF attachment protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567600.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SPE5, Q9SUN8
      UniProtKB/TrEMBL
      A0A178V293, Q24JN4
      Conserved Domains (2) summary
      sd00006
      Location:143 → 180
      TPR; TPR repeat [structural motif]
      cd15832
      Location:4 → 273
      SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family

    2. NM_001341437.1 → NP_001328932.1  gamma-soluble NSF attachment protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V293, A0A1P8B661
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SPE5.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools