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    WRKY family transcription factor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829309, updated on 18-Sep-2024

    Summary

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    Official Full Name
    WRKY family transcription factor
    Primary source
    TAIR:AT4G31805
    Locus tag
    AT4G31805
    See related
    Araport:AT4G31805
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    POLAR; POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION
    Summary
    Encodes POLAR, a protein associated with cellular asymmetry of meristemoids. Its transcript levels change after inducing MUTE expression in a mute background.
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (15385280..15387097)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene WRKY DNA-binding protein 18 Neighboring gene ATP-dependent caseinolytic (Clp) protease/crotonase family protein Neighboring gene Phototropic-responsive NPH3 family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cell type-specific attenuation of brassinosteroid signaling precedes stomatal asymmetric cell division. Kim EJ, et al. Proc Natl Acad Sci U S A, 2023 Sep 5. PMID 37639582, Free PMC Article
    2. Molecular profiling of stomatal meristemoids reveals new component of asymmetric cell division and commonalities among stem cell populations in Arabidopsis. Pillitteri LJ, et al. Plant Cell, 2011 Sep. PMID 21963668, Free PMC Article
    3. POLAR-guided signalling complex assembly and localization drive asymmetric cell division. Houbaert A, et al. Nature, 2018 Nov. PMID 30429609
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_119330.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular adaptor activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in asymmetric cell division IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in guard cell differentiation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell periphery IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WRKY family transcription factor
    NP_567883.1
    • WRKY family transcription factor; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G10890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15385280..15387097
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119330.3 → NP_567883.1  WRKY family transcription factor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567883.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6NQ99
      UniProtKB/TrEMBL
      A0A5S9XY22
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NQ99.1

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