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    Galactose mutarotase-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823934, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Galactose mutarotase-like superfamily protein
    Primary source
    TAIR:AT3G47800
    Locus tag
    AT3G47800
    See related
    Araport:AT3G47800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (17634804..17637204)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ABC2 homolog 6 Neighboring gene ABC2 homolog 7 Neighboring gene ncRNA Neighboring gene Calcineurin-like metallo-phosphoesterase superfamily protein Neighboring gene PLANT U-BOX 39

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_114648.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables aldose 1-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables aldose 1-epimerase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in hexose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Galactose mutarotase-like superfamily protein
    NP_190364.1
    • Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 4663 Blast hits to 4656 proteins in 1452 species: Archae - 5; Bacteria - 3197; Metazoa - 273; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 712 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      17634804..17637204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114648.5 → NP_190364.1  Galactose mutarotase-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190364.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FF37, Q8LFH1, Q9STT3
      Conserved Domains (1) summary
      cl14648
      Location:29 → 357
      Aldose_epim; aldose 1-epimerase superfamily
    Nucleotide Protein
    Heading Accession and Version

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