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    GRP17 glycine rich protein 17 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830646, updated on 18-Sep-2024

    Summary

    Official Symbol
    GRP17
    Official Full Name
    glycine rich protein 17
    Primary source
    TAIR:AT5G07530
    Locus tag
    AT5G07530
    See related
    Araport:AT5G07530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA GLYCINE RICH PROTEIN 17; ARABIDOPSIS THALIANA GLYCINE RICH PROTEIN 7; ATGRP-7; ATGRP17; glycine rich protein 17; T2I1.240; T2I1_240
    Summary
    encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat.
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    Genomic context

    See GRP17 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (2382381..2384525, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene glycine-rich protein 14 Neighboring gene glycine-rich protein 18 Neighboring gene uncharacterized protein Neighboring gene glycine-rich protein 16 Neighboring gene glycine-rich protein 19

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001125713.1
    NM_120835.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables lipid binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in anther wall tapetum morphogenesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within pollen hydration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in pollen hydration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in recognition of pollen IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within sexual reproduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in monolayer-surrounded lipid storage body IEA
    Inferred from Electronic Annotation
    more info
     
    located_in pollen coat IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    glycine rich protein 17
    NP_001119185.1
    • glycine rich protein 17 (GRP17); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid storage, sexual reproduction, pollen hydration; LOCATED IN: extracellular matrix, extracellular region, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: glycine-rich protein 18 (TAIR:AT5G07520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_196370.1
    • glycine rich protein 17 (GRP17); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid storage, sexual reproduction, pollen hydration; LOCATED IN: extracellular matrix, extracellular region, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: glycine-rich protein 18 (TAIR:AT5G07520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2382381..2384525 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342948.1NP_001331377.1  glycine rich protein 17 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BDM8
    2. NM_001125713.1NP_001119185.1  glycine rich protein 17 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119185.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LY09
      Conserved Domains (1) summary
      pfam01277
      Location:64147
      Oleosin; Oleosin
    3. NM_120835.3NP_196370.1  glycine rich protein 17 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196370.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H5N1, Q43302, Q9LY09
      Conserved Domains (1) summary
      pfam01277
      Location:64147
      Oleosin; Oleosin