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    Plant calmodulin-binding protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833934, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plant calmodulin-binding protein-like protein
    Primary source
    TAIR:AT5G39380
    Locus tag
    AT5G39380
    See related
    Araport:AT5G39380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MUL8.6; MUL8_6
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (15758717..15761747, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Curculin-like (mannose-binding) lectin family protein Neighboring gene ncRNA Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene Calcium/lipid-binding (CaLB) phosphatase Neighboring gene Saccharopine dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001344290.1
    NM_001344291.1
    NM_001344292.1
    NM_001344294.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    Plant calmodulin-binding protein-like protein
    NP_001318704.1
    • Plant calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT5G15430.1); Has 1562 Blast hits to 1366 proteins in 187 species: Archae - 0; Bacteria - 45; Metazoa - 751; Fungi - 101; Plants - 192; Viruses - 10; Other Eukaryotes - 463 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      15758717..15761747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344293.1 → NP_001330189.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6U6, A0A7G2FCC9, Q9FLZ6
      Conserved Domains (1) summary
      pfam07839
      Location:395 → 503
      CaM_binding; Plant calmodulin-binding domain

    2. NM_001344290.1 → NP_001318704.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6U6, A0A7G2FCC9, Q9FLZ6
      Conserved Domains (1) summary
      pfam07839
      Location:395 → 503
      CaM_binding; Plant calmodulin-binding domain

    3. NM_001344292.1 → NP_001330186.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6U6, A0A7G2FCC9, Q9FLZ6
      Conserved Domains (1) summary
      pfam07839
      Location:395 → 503
      CaM_binding; Plant calmodulin-binding domain

    4. NM_001344291.1 → NP_001330187.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6U6, A0A7G2FCC9, Q9FLZ6
      Conserved Domains (1) summary
      pfam07839
      Location:395 → 503
      CaM_binding; Plant calmodulin-binding domain

    5. NM_001344294.1 → NP_001330188.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6U6, A0A7G2FCC9, Q9FLZ6
      Conserved Domains (1) summary
      pfam07839
      Location:395 → 503
      CaM_binding; Plant calmodulin-binding domain
    Nucleotide Protein
    Heading Accession and Version

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