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    AATP1 AAA-ATPase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833998, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AATP1
    Official Full Name
    AAA-ATPase 1
    Primary source
    TAIR:AT5G40010
    Locus tag
    AT5G40010
    See related
    Araport:AT5G40010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AAA-ATPase 1; ASD; ATPase-in-Seed-Development; MYH19.21; MYH19_21
    Summary
    Encodes a mitochondrial ATPase involved in seed and silique development.
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    Genomic context

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    See AATP1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (16020058..16021916, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene Pathogenesis-related thaumatin superfamily protein Neighboring gene Protein kinase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Activation of a mitochondrial ATPase gene induces abnormal seed development in Arabidopsis. Baek K, et al. Mol Cells, 2011 Apr. PMID 21359673, Free PMC Article
    2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within fruit development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to water deprivation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within seed maturation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    AAA-ATPase 1
    NP_198817.1
    • AAA-ATPase 1 (AATP1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 35875 Blast hits to 26437 proteins in 2942 species: Archae - 1242; Bacteria - 8120; Metazoa - 8429; Fungi - 4077; Plants - 2736; Viruses - 205; Other Eukaryotes - 11066 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16020058..16021916 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123364.2 → NP_198817.1  AAA-ATPase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198817.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FLD5
      UniProtKB/TrEMBL
      A0A5S9YAK0, A0A654G716
      Conserved Domains (3) summary
      smart00382
      Location:243 → 393
      AAA; ATPases associated with a variety of cellular activities
      pfam00004
      Location:246 → 395
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam14363
      Location:29 → 124
      AAA_assoc; Domain associated at C-terminal with AAA
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FLD5.1

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