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    EXL4 EXORDIUM like 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830803, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EXL4
    Official Full Name
    EXORDIUM like 4
    Primary source
    TAIR:AT5G09440
    Locus tag
    AT5G09440
    See related
    Araport:AT5G09440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EXORDIUM like 4; T5E8.240; T5E8_240
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    Genomic context

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    See EXL4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (2938193..2939715)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ethylene induced calmodulin binding protein Neighboring gene translocon at the outer membrane of chloroplasts 64-V Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The extracellular lipase EXL4 is required for efficient hydration of Arabidopsis pollen. Updegraff EP, et al. Sex Plant Reprod, 2009 Sep. PMID 20033440
    2. An Arabidopsis (malectin-like) leucine-rich repeat receptor-like kinase contributes to downy mildew disease. Hok S, et al. Plant Cell Environ, 2011 Nov. PMID 21711359
    3. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    4. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. EXL4 is required for efficient hydration of pollen.
      Title: The extracellular lipase EXL4 is required for efficient hydration of Arabidopsis pollen.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_120981.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to oomycetes IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    EXORDIUM like 4
    NP_196506.1
    • EXORDIUM like 4 (EXL4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 2 (TAIR:AT5G64260.1); Has 396 Blast hits to 396 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2938193..2939715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120981.3 → NP_196506.1  EXORDIUM like 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196506.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FY71
      UniProtKB/TrEMBL
      A0A178UJ96, A0A5S9Y3E1, A0A654G016
      Conserved Domains (1) summary
      pfam04674
      Location:33 → 277
      Phi_1; Phosphate-induced protein 1 conserved region
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FY71.1

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