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    CYP84A4 Cytochrome P450 superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830312, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP84A4
    Official Full Name
    Cytochrome P450 superfamily protein
    Primary source
    TAIR:AT5G04330
    Locus tag
    AT5G04330
    See related
    Araport:AT5G04330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CYTOCHROME P450 84A4; T19N18.60; T19N18_60
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    Genomic context

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    See CYP84A4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (1212532..1214439, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene kow domain-containing transcription factor 1 Neighboring gene Pectin lyase-like superfamily protein Neighboring gene Shugoshin C terminus Neighboring gene 6 Neighboring gene Plant self-incompatibility protein S1 family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Assembly of an evolutionarily new pathway for α-pyrone biosynthesis in Arabidopsis. Weng JK, et al. Science, 2012 Aug 24. PMID 22923580
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_120515.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables monooxygenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Cytochrome P450 superfamily protein
    NP_196053.2
    • Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: ferulic acid 5-hydroxylase 1 (TAIR:AT4G36220.1); Has 34679 Blast hits to 34410 proteins in 1775 species: Archae - 74; Bacteria - 4291; Metazoa - 12124; Fungi - 7284; Plants - 9486; Viruses - 6; Other Eukaryotes - 1414 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      1212532..1214439 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120515.3 → NP_196053.2  Cytochrome P450 superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196053.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JW83, Q9LKP9
      UniProtKB/TrEMBL
      A0A178UCN2, A0A5S9Y251
      Conserved Domains (1) summary
      cl12078
      Location:31 → 509
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JW83.1

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