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    EMB2795 condensin complex subunit [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817819, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EMB2795
    Official Full Name
    condensin complex subunit
    Primary source
    TAIR:AT2G32590
    Locus tag
    AT2G32590
    See related
    Araport:AT2G32590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EMBRYO DEFECTIVE 2795; T26B15.15; T26B15_15
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    Genomic context

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    See EMB2795 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Sequence:
    Chromosome: 2; NC_003071.7 (13829290..13833342, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene F-box family protein Neighboring gene transmembrane protein, putative (DUF1068) Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene cellulose synthase-like B1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization and dynamic analysis of Arabidopsis condensin subunits, AtCAP-H and AtCAP-H2. Fujimoto S, et al. Planta, 2005 Oct. PMID 15883832
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_128818.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in mitotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in condensed chromosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of condensin complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    condensin complex subunit
    NP_180818.2
    • LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13829290..13833342 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128818.3 → NP_180818.2  condensin complex subunit [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180818.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80896, Q564K3
      UniProtKB/TrEMBL
      A0A654EY61, A0A7G2EDW1
      Conserved Domains (1) summary
      cl19886
      Location:74 → 668
      Cnd2; Condensin complex subunit 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q564K3.1

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