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    Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815406, updated on 18-Sep-2024

    Summary

    Official Full Name
    Alpha-L RNA-binding motif/Ribosomal protein S4 family protein
    Primary source
    TAIR:AT2G07734
    Locus tag
    AT2G07734
    See related
    Araport:AT2G07734
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5E7.5; T5E7_5
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    Genomic context

    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (3472305..3473692, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Interactions

    General gene information

    NM_126764.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in mitochondrion  

    General protein information

    Preferred Names
    Alpha-L RNA-binding motif/Ribosomal protein S4 family protein
    NP_178806.1
    • Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: mitochondrial ribosomal protein S4 (TAIR:ATMG00290.1); Has 1839 Blast hits to 1839 proteins in 823 species: Archae - 0; Bacteria - 683; Metazoa - 0; Fungi - 0; Plants - 800; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      3472305..3473692 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126764.2 → NP_178806.1  Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178806.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YJ31, A0A654GF22
      Conserved Domains (1) summary
      cd00165
      Location:106 → 157
      S4; S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized ...
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