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    PCR11 PLANT CADMIUM RESISTANCE 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843191, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PCR11
    Official Full Name
    PLANT CADMIUM RESISTANCE 11
    Primary source
    TAIR:AT1G68610
    Locus tag
    AT1G68610
    See related
    Araport:AT1G68610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24J5.15; F24J5_15; PLANT CADMIUM RESISTANCE 11
    Summary
    Target promoter of the male germline-specific transcription factor DUO1.
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    Genomic context

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    See PCR11 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (25763459..25764207)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein PSRP-3/Ycf65 Neighboring gene aluminum activated malate transporter family protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene PLAC8 family protein Neighboring gene bZIP transcription factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The R2R3 MYB transcription factor DUO1 activates a male germline-specific regulon essential for sperm cell differentiation in Arabidopsis. Borg M, et al. Plant Cell, 2011 Feb. PMID 21285328, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105533.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within pollen sperm cell differentiation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    PLANT CADMIUM RESISTANCE 11
    NP_177028.1
    • PLANT CADMIUM RESISTANCE 11 (PCR11); CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLANT CADMIUM RESISTANCE 2 (TAIR:AT1G14870.1); Has 766 Blast hits to 765 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 89; Plants - 558; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25763459..25764207
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105533.2 → NP_177028.1  PLANT CADMIUM RESISTANCE 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177028.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SX24
      UniProtKB/TrEMBL
      A0A5S9WQY4, A0A654EMH6
      Conserved Domains (1) summary
      pfam04749
      Location:19 → 119
      PLAC8; PLAC8 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SX24.1

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