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    PLMT phospholipid N-methyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844425, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PLMT
    Official Full Name
    phospholipid N-methyltransferase
    Primary source
    TAIR:AT1G80860
    Locus tag
    AT1G80860
    See related
    Araport:AT1G80860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS PHOSPHOLIPID N-METHYLTRANSFERASE; ATPLMT; F23A5.21; F23A5_21; phospholipid N-methyltransferase
    Summary
    Encodes a single-copy phospholipid N-methyltransferase, involved in phosphatidylcholine biosynthesis. Has specific activity towards phosphatidylmonomethylethanolamine and phosphatidyldimethylethanolamine, but not phosphatidylethanolamine.
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    Genomic context

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    See PLMT in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (30387978..30389434, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene WRKY DNA-binding protein 40 Neighboring gene DNA glycosylase superfamily protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Protein kinase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional characterization of phospholipid N-methyltransferases from Arabidopsis and soybean. Keogh MR, et al. J Biol Chem, 2009 Jun 5. PMID 19366698, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_106734.2
    NM_179585.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidyl-N-methylethanolamine N-methyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within methylation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in phosphatidylcholine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phospholipid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in intracellular membrane-bounded organelle IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phospholipid N-methyltransferase
    NP_565246.1
    • phospholipid N-methyltransferase (PLMT); CONTAINS InterPro DOMAIN/s: Phospholipid methyltransferase (InterPro:IPR007318); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_849916.2
    • phospholipid N-methyltransferase (PLMT); CONTAINS InterPro DOMAIN/s: Phospholipid methyltransferase (InterPro:IPR007318); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      30387978..30389434 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179585.4 → NP_849916.2  phospholipid N-methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849916.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWP8, Q9SAH5
      UniProtKB/TrEMBL
      A0A5S9WW65, A0A654ESG0
      Conserved Domains (1) summary
      PLN02797
      Location:1 → 164
      PLN02797; phosphatidyl-N-dimethylethanolamine N-methyltransferase

    2. NM_106734.2 → NP_565246.1  phospholipid N-methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565246.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWP8, Q9SAH5
      UniProtKB/TrEMBL
      A0A5S9WW65, A0A654ESG0
      Conserved Domains (1) summary
      PLN02797
      Location:1 → 164
      PLN02797; phosphatidyl-N-dimethylethanolamine N-methyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SAH5.1

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