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    cyclin/Brf1-like TBP-binding domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 6240845, updated on 18-Sep-2024

    Summary

    Official Full Name
    cyclin/Brf1-like TBP-binding domain-containing protein
    Primary source
    TAIR:AT1G30455
    Locus tag
    AT1G30455
    See related
    Araport:AT1G30455
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (10769722..10770775)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Phototropic-responsive NPH3 family protein Neighboring gene cation-chloride co-transporter 1 Neighboring gene cleavage and polyadenylation specificity factor 30 Neighboring gene ncRNA Neighboring gene ncRNA

    General gene information

    NM_001123917.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables TBP-class protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in transcription preinitiation complex assembly IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    cyclin/Brf1-like TBP-binding domain-containing protein
    NP_001117389.1
    • transcription regulators;translation initiation factors;zinc ion binding;transcription activators; FUNCTIONS IN: transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10769722..10770775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001123917.1NP_001117389.1  cyclin/Brf1-like TBP-binding domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117389.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4I4V4, Q9S9Q7
      Conserved Domains (2) summary
      cd00043
      Location:1282
      CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
      pfam07741
      Location:115215
      BRF1; Brf1-like TBP-binding domain