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    COP9 signalosome complex-related / CSN complex-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820467, updated on 18-Sep-2024

    Summary

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    Official Full Name
    COP9 signalosome complex-related / CSN complex-like protein
    Primary source
    TAIR:AT3G12850
    Locus tag
    AT3G12850
    See related
    Araport:AT3G12850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (4088374..4090303, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene F-box/FBD-like domain protein Neighboring gene ncRNA Neighboring gene NOP56-like pre RNA processing ribonucleoprotein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    COP9 signalosome complex-related / CSN complex-like protein
    NP_187891.1
    • COP9 signalosome complex-related / CSN complex-related; BEST Arabidopsis thaliana protein match is: 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (TAIR:AT3G61140.1); Has 103 Blast hits to 103 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4088374..4090303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112121.1 → NP_187891.1  COP9 signalosome complex-related / CSN complex-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187891.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XBR4, F4JAZ8
    Nucleotide Protein
    Heading Accession and Version

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