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    Ulp1 protease family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826402, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ulp1 protease family protein
    Primary source
    TAIR:AT4G08430
    Locus tag
    AT4G08430
    See related
    Araport:AT4G08430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    C18G5.10; C18G5_10
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (5347396..5350436, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Proline-rich extensin-like family protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cysteine-type peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within proteolysis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ulp1 protease family protein
    NP_192583.1
    • Ulp1 protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1985 (InterPro:IPR015410), Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Ulp1 protease family protein (TAIR:AT5G45570.1); Has 1575 Blast hits to 1350 proteins in 240 species: Archae - 13; Bacteria - 177; Metazoa - 404; Fungi - 120; Plants - 315; Viruses - 3; Other Eukaryotes - 543 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      5347396..5350436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116912.1 → NP_192583.1  Ulp1 protease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192583.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FMH6, Q9SW62
      Conserved Domains (2) summary
      pfam02902
      Location:577 → 788
      Peptidase_C48; Ulp1 protease family, C-terminal catalytic domain
      pfam09331
      Location:2 → 127
      DUF1985; Domain of unknown function (DUF1985)
    Nucleotide Protein
    Heading Accession and Version

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