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    MEE53 Cysteine/Histidine-rich C1 domain family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826648, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MEE53
    Official Full Name
    Cysteine/Histidine-rich C1 domain family protein
    Primary source
    TAIR:AT4G10560
    Locus tag
    AT4G10560
    See related
    Araport:AT4G10560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    maternal effect embryo arrest 53; T4F9.20; T4F9_20
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    Genomic context

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    See MEE53 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (6520771..6523014, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Subtilase family protein Neighboring gene Subtilase family protein Neighboring gene ubiquitin-specific protease 9 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Pagnussat GC, et al. Development, 2005 Feb. PMID 15634699
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Cysteine/Histidine-rich C1 domain family protein
    NP_192794.1
    • maternal effect embryo arrest 53 (MEE53); FUNCTIONS IN: zinc ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G02540.1); Has 1438 Blast hits to 607 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1438; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      6520771..6523014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117124.2 → NP_192794.1  Cysteine/Histidine-rich C1 domain family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192794.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V3X6, Q9ZSB4
      Conserved Domains (2) summary
      pfam03107
      Location:606 → 636
      C1_2; C1 domain
      pfam07649
      Location:434 → 463
      C1_3; C1-like domain
    Nucleotide Protein
    Heading Accession and Version

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