NAC073 NAC domain containing protein 73 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: NAC073
Official Full Name: NAC domain containing protein 73
Primary source: TAIR:AT4G28500
Locus tag: AT4G28500
See related: Araport:AT4G28500
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ANAC073; F20O9.190; F20O9_190; NAC domain containing protein 73; SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 2; SND2
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Genomic context

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See NAC073 in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 3

Sequence:: Chromosome: 4; NC_003075.7 (14082660..14084553)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

SND2 regulates cellulose and hemicellulose biosynthetic genes in addition to those involved in lignin polymerization and signalling.
Title: SND2, a NAC transcription factor gene, regulates genes involved in secondary cell wall development in Arabidopsis fibres and increases fibre cell area in Eucalyptus.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_118992.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables transcription cis-regulatory region binding	IDA Inferred from Direct Assay more info	PubMed
enables transcription cis-regulatory region binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within positive regulation of DNA-templated transcription	IDA Inferred from Direct Assay more info	PubMed
acts_upstream_of_or_within regulation of secondary cell wall biogenesis	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IDA Inferred from Direct Assay more info	PubMed
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: NAC domain containing protein 73

NP_194579.1

NAC domain containing protein 73 (NAC073); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 10 (TAIR:AT1G28470.1); Has 2322 Blast hits to 2317 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2321; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

14082660..14084553

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_118992.3 → NP_194579.1 NAC domain containing protein 73 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_194579.1

Status: REVIEWED

UniProtKB/Swiss-Prot

O49459

UniProtKB/TrEMBL

A0A178V4Y3, A0A5S9XWP1

Conserved Domains (1) summary

pfam02365
Location:60 → 200

NAM; No apical meristem (NAM) protein