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    threonine-tRNA ligase 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824899, updated on 18-Sep-2024

    Summary

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    Official Full Name
    threonine-tRNA ligase 2
    Primary source
    TAIR:AT3G57320
    Locus tag
    AT3G57320
    See related
    Araport:AT3G57320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (21209916..21211445)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3E Neighboring gene DNA helicase INO80-like protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene autoinhibited Ca2+-ATPase 11 Neighboring gene DnaJ heat shock amino-terminal domain protein (DUF1977) Neighboring gene ncRNA Neighboring gene Nucleoporin interacting component (Nup93/Nic96-like) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001339852.1
    NM_115592.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    threonine-tRNA ligase 2
    NP_001319777.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_191291.1
    • unknown protein; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21209916..21211445
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115592.5 → NP_191291.1  threonine-tRNA ligase 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191291.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VLZ4, A0A384L5I8, A0A5S9XNC3, A0A654FIL1, Q9M2L5

    2. NM_001339852.1 → NP_001319777.1  threonine-tRNA ligase 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MQN7
    Nucleotide Protein
    Heading Accession and Version

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