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    Disease resistance protein (CC-NBS-LRR class) family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834394, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Disease resistance protein (CC-NBS-LRR class) family
    Primary source
    TAIR:AT5G43740
    Locus tag
    AT5G43740
    See related
    Araport:AT5G43740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQD19.7; MQD19_7
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (17564697..17569148)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene rRNA-processing EFG1-like protein (DUF2361) Neighboring gene ncRNA Neighboring gene Disease resistance protein (CC-NBS-LRR class) family Neighboring gene ion channel POLLUX-like protein, putative (DUF1012) Neighboring gene NAD(P)H dehydrogenase 18 Neighboring gene non-LTR retrolelement reverse transcriptase-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_123740.5
    NM_180795.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Disease resistance protein (CC-NBS-LRR class) family
    NP_199187.1
    • Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_851126.1
    • Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43730.1); Has 13811 Blast hits to 13486 proteins in 476 species: Archae - 7; Bacteria - 232; Metazoa - 616; Fungi - 57; Plants - 12812; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17564697..17569148
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123740.5 → NP_199187.1  Disease resistance protein (CC-NBS-LRR class) family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199187.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FG90
      UniProtKB/TrEMBL
      A0A5S9YB92, A0A654G7R0
      Conserved Domains (3) summary
      sd00031
      Location:536 → 558
      LRR_1; leucine-rich repeat [structural motif]
      pfam00931
      Location:155 → 396
      NB-ARC; NB-ARC domain
      pfam13855
      Location:532 → 589
      LRR_8; Leucine rich repeat

    2. NM_180795.3 → NP_851126.1  Disease resistance protein (CC-NBS-LRR class) family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851126.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FG90
      UniProtKB/TrEMBL
      A0A5S9YB92, A0A654G7R0
      Conserved Domains (3) summary
      sd00031
      Location:536 → 558
      LRR_1; leucine-rich repeat [structural motif]
      pfam00931
      Location:155 → 396
      NB-ARC; NB-ARC domain
      pfam13855
      Location:532 → 589
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FG90.1

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