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    Eukaryotic aspartyl protease family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841016, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Eukaryotic aspartyl protease family protein
    Primary source
    TAIR:AT1G44130
    Locus tag
    AT1G44130
    See related
    Araport:AT1G44130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T7O23.17; T7O23_17
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (16787508..16789436, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Cyclin A1;1 Neighboring gene CELLULOSE SYNTHASE INTERACTIVE 2 Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Bayer EM, et al. Proteomics, 2006 Jan. PMID 16287169
    2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall HDA PubMed 

    General protein information

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    Preferred Names
    Eukaryotic aspartyl protease family protein
    NP_175079.1
    • Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, embryo, pedicel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G77480.2); Has 1835 Blast hits to 1829 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 37; Plants - 1697; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16787508..16789436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103539.2 → NP_175079.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175079.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WM43, A0A5S9WMH7, A0A654EL64, Q9C6Y5
      Conserved Domains (1) summary
      cd05475
      Location:47 → 399
      nucellin_like; Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation
    Nucleotide Protein
    Heading Accession and Version

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