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    Ubiquitin-associated (UBA) protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817863, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ubiquitin-associated (UBA) protein
    Primary source
    TAIR:AT2G33010
    Locus tag
    AT2G33010
    See related
    Araport:AT2G33010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T21L14.2
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (14010838..14013246)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glycosyl hydrolase 9B8 Neighboring gene ubiquitin-associated (UBA)/TS-N domain-containing protein-like protein Neighboring gene receptor like protein 24 Neighboring gene receptor like protein 25

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128861.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ubiquitin-associated (UBA) protein
    NP_180860.1
    • Ubiquitin-associated (UBA) protein; CONTAINS InterPro DOMAIN/s: UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein-related (TAIR:AT2G33000.1); Has 31 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 1; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14010838..14013246
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128861.2 → NP_180860.1  Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180860.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VR76, O50062
      Conserved Domains (4) summary
      cd14273
      Location:14 → 38
      UBA_TAP-C_like; UBA-like domain found in the NXF family of mRNA nuclear export factors and similar proteins
      cd14352
      Location:429 → 464
      UBA_DCN1; UBA-like domain found in yeast defective in cullin neddylation protein 1 (DCN1) and similar proteins
      pfam14555
      Location:121 → 163
      UBA_4; UBA-like domain
      cl21463
      Location:333 → 367
      UBA_like_SF; UBA domain-like superfamily
    Nucleotide Protein
    Heading Accession and Version

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