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    CYP78A6 cytochrome P450, family 78, subfamily A, polypeptide 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819278, updated on 18-Sep-2024

    Summary

    Official Symbol
    CYP78A6
    Official Full Name
    cytochrome P450, family 78, subfamily A, polypeptide 6
    Primary source
    TAIR:AT2G46660
    Locus tag
    AT2G46660
    See related
    Araport:AT2G46660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cytochrome P450; enhancer of da1-1; EOD3; family 78; polypeptide 6; subfamily A; T3A4.4; T3A4_4
    Summary
    Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth.
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    Genomic context

    See CYP78A6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (19153328..19155579, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene NAD-dependent protein deacetylase HST1-like protein Neighboring gene cytochrome B5 isoform C Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene CCT motif family protein

    General gene information

    NM_130231.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within seed development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within seed development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    cytochrome P450, family 78, subfamily A, polypeptide 6
    NP_182189.1
    • ''cytochrome P450, family 78, subfamily A, polypeptide 6'' (CYP78A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome p450 78a9 (TAIR:AT3G61880.2); Has 32637 Blast hits to 32519 proteins in 1695 species: Archae - 48; Bacteria - 3588; Metazoa - 11617; Fungi - 7095; Plants - 9209; Viruses - 3; Other Eukaryotes - 1077 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19153328..19155579 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130231.4NP_182189.1  cytochrome P450, family 78, subfamily A, polypeptide 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182189.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZNR0
      UniProtKB/TrEMBL
      A0A178VUK6, A0A5S9X8C4, A0A654F3S3
      Conserved Domains (1) summary
      cl12078
      Location:25523
      p450; Cytochrome P450