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    TLP2 tubby like protein 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816344, updated on 18-Sep-2024

    Summary

    Official Symbol
    TLP2
    Official Full Name
    tubby like protein 2
    Primary source
    TAIR:AT2G18280
    Locus tag
    AT2G18280
    See related
    Araport:AT2G18280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtTLP2; T30D6.21; T30D6_21; tubby like protein 2
    Summary
    Member of TLP family
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    Genomic context

    See TLP2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (7945998..7948468)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene 4-phosphopantetheine adenylyltransferase Neighboring gene syntaxin of plants 112 Neighboring gene uncharacterized protein Neighboring gene anaphase promoting complex 10 Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene tRNA-Asn

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001036292.2
    NM_179644.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plastid IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    tubby like protein 2
    NP_001031369.1
    • tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_849975.1
    • tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 957 Blast hits to 948 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 352; Fungi - 19; Plants - 471; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7945998..7948468
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036292.2NP_001031369.1  tubby like protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031369.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7Y213, Q8GVE5, Q9ZPW1
      UniProtKB/TrEMBL
      A0A178W0L9, A0A5S9WZ97, B9DGB6
      Conserved Domains (2) summary
      pfam01167
      Location:112386
      Tub; Tub family
      pfam12937
      Location:4891
      F-box-like; F-box-like
    2. NM_179644.2NP_849975.1  tubby like protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849975.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7Y213, Q8GVE5, Q9ZPW1
      UniProtKB/TrEMBL
      A0A178W0L9, A0A5S9WZ97, B9DGB6
      Conserved Domains (2) summary
      pfam01167
      Location:112386
      Tub; Tub family
      pfam12937
      Location:4891
      F-box-like; F-box-like