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    ENTH/VHS/GAT family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837130, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ENTH/VHS/GAT family protein
    Primary source
    TAIR:AT1G06210
    Locus tag
    AT1G06210
    See related
    Araport:AT1G06210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9P14.7; F9P14_7
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (1897129..1899237)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Rho termination factor Neighboring gene Peptidase S24/S26A/S26B/S26C family protein Neighboring gene Ribosomal protein S5/Elongation factor G/III/V family protein Neighboring gene CLAVATA3/ESR-RELATED 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis TOL proteins act as gatekeepers for vacuolar sorting of PIN2 plasma membrane protein. Korbei B, et al. Curr Biol, 2013 Dec 16. PMID 24316203
    2. Protein-Protein Interaction Network and Subcellular Localization of the Arabidopsis Thaliana ESCRT Machinery. Richardson LG, et al. Front Plant Sci, 2011. PMID 22639582, Free PMC Article
    3. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_100502.4
    NM_202041.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ubiquitin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ENTH/VHS/GAT family protein
    NP_563762.1
    • ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT5G16880.2); Has 1326 Blast hits to 1324 proteins in 178 species: Archae - 0; Bacteria - 6; Metazoa - 730; Fungi - 235; Plants - 256; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).
    NP_973770.1
    • ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT5G16880.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1897129..1899237
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100502.4 → NP_563762.1  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563762.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IC14, Q9LNC6
      UniProtKB/TrEMBL
      A0A5S9SXI5, A0A654E993
      Conserved Domains (2) summary
      cd03561
      Location:39 → 164
      VHS; VHS (Vps27/Hrs/STAM) domain family
      cd14231
      Location:231 → 308
      GAT_GGA-like_plant; canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

    2. NM_202041.2 → NP_973770.1  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973770.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LNC6
      Conserved Domains (1) summary
      cd03561
      Location:39 → 164
      VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LNC6.1

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