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    RPL12-B ribosomal protein L12-B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822404, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RPL12-B
    Official Full Name
    ribosomal protein L12-B
    Primary source
    TAIR:AT3G27840
    Locus tag
    AT3G27840
    See related
    Araport:AT3G27840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ribosomal protein L12-B
    Summary
    50S ribosomal protein L12-B
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    Genomic context

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    See RPL12-B in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (10323354..10323950)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ribosomal protein L12-A Neighboring gene Gamma-thionin family protein Neighboring gene Gamma-thionin family protein Neighboring gene tRNA-Pro Neighboring gene ribosomal protein L12-C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multicopy GTPase center protein L12 of Arabidopsis chloroplast ribosome is encoded by a clustered nuclear gene family with the expressed members closely linked to tRNA(Pro) genes. Weglöhner W, et al. J Biol Chem, 1994 Mar 11. PMID 8125949
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    part_of plastid large ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal protein L12-B
    NP_189422.1
    • ribosomal protein L12-B (RPL12-B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: petiole; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-A (TAIR:AT3G27830.1); Has 8338 Blast hits to 8338 proteins in 2732 species: Archae - 0; Bacteria - 5642; Metazoa - 147; Fungi - 128; Plants - 247; Viruses - 0; Other Eukaryotes - 2174 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10323354..10323950
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113700.1 → NP_189422.1  ribosomal protein L12-B [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189422.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P36211, Q9LK93
      UniProtKB/TrEMBL
      A0A178VIL7, A0A5S9XGF4, A0A654FD89, A0A7G2ET98
      Conserved Domains (1) summary
      CHL00083
      Location:65 → 193
      rpl12; ribosomal protein L12
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P36211.2

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