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    RLP54 receptor like protein 54 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834015, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP54
    Official Full Name
    receptor like protein 54
    Primary source
    TAIR:AT5G40170
    Locus tag
    AT5G40170
    See related
    Araport:AT5G40170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP54; MSN9.70; MSN9_70; receptor like protein 54
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    Genomic context

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    See RLP54 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (16064859..16067628, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Peroxidase superfamily protein Neighboring gene peroxidase Neighboring gene Defensin-like (DEFL) family protein Neighboring gene Ankyrin repeat family protein Neighboring gene Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein Neighboring gene RNA ligase/cyclic nucleotide phosphodiesterase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123381.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    receptor like protein 54
    NP_198833.1
    • receptor like protein 54 (RLP54); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 27 (TAIR:AT2G33060.1); Has 95502 Blast hits to 27133 proteins in 1050 species: Archae - 52; Bacteria - 4975; Metazoa - 18576; Fungi - 1120; Plants - 63605; Viruses - 17; Other Eukaryotes - 7157 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16064859..16067628 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123381.3 → NP_198833.1  receptor like protein 54 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198833.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4KHA2, Q9FL15
      UniProtKB/TrEMBL
      A0A5S9YA42, A0A654G6Q6
      Conserved Domains (2) summary
      PLN00113
      Location:113 → 724
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:116 → 140
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4KHA2.1

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