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    ARAD2 Exostosin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834523, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARAD2
    Official Full Name
    Exostosin family protein
    Primary source
    TAIR:AT5G44930
    Locus tag
    AT5G44930
    See related
    Araport:AT5G44930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABINAN DEFICIENT 2; ARABINOSYLTRANSFERASE; K21C13.11; K21C13_11
    Summary
    Encodes a putative arabinosyltransferase that is associated with arabinan biosynthesis and is not redundant with ARAD1. The two glycosyltransferases may function in complexes held together by disulfide bridges.
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    Genomic context

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    See ARAD2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (18138775..18142159, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cell wall pectic arabinans influence the mechanical properties of Arabidopsis thaliana inflorescence stems and their response to mechanical stress. Verhertbruggen Y, et al. Plant Cell Physiol, 2013 Aug. PMID 23695504
    2. ARAD proteins associated with pectic Arabinan biosynthesis form complexes when transiently overexpressed in planta. Harholt J, et al. Planta, 2012 Jul. PMID 22270560
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Arabinan deficient (arad) mutants display an altered response to mechanical stress in terms of inflorescence stem length reduction.
      Title: Cell wall pectic arabinans influence the mechanical properties of Arabidopsis thaliana inflorescence stems and their response to mechanical stress.
    2. These data show that ARAD2 is associated with arabinan biosynthesis, not redundant with ARAD1, and that the two glycosyltransferases may function in complexes held together by disulfide bridges in Arabidopsis thaliana.
      Title: ARAD proteins associated with pectic Arabinan biosynthesis form complexes when transiently overexpressed in planta.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001344577.1
    NM_123861.3
    NM_180801.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within arabinan biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within plant-type cell wall biogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Exostosin family protein
    NP_199306.1
    • ARABINAN DEFICIENT 2 (ARAD2); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1289 Blast hits to 1285 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 4; Plants - 990; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
    NP_851132.1
    • ARABINAN DEFICIENT 2 (ARAD2); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1289 Blast hits to 1285 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 4; Plants - 990; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18138775..18142159 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180801.2 → NP_851132.1  Exostosin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851132.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FLA5
      UniProtKB/TrEMBL
      A0A178UFZ9
      Conserved Domains (1) summary
      pfam03016
      Location:66 → 364
      Exostosin; Exostosin family

    2. NM_123861.3 → NP_199306.1  Exostosin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199306.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FLA5
      UniProtKB/TrEMBL
      A0A178UFZ9
      Conserved Domains (1) summary
      pfam03016
      Location:66 → 364
      Exostosin; Exostosin family

    3. NM_001344577.1 → NP_001331586.1  Exostosin family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFZ9, A0A1P8BEB5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FLA5.1

    Gene LinkOut

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