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    HAP8 hapless 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835724, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HAP8
    Official Full Name
    hapless 8
    Primary source
    TAIR:AT5G56250
    Locus tag
    AT5G56250
    See related
    Araport:AT5G56250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    HAPLESS 8; K24C1.6; K24C1_6
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    Genomic context

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    See HAP8 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (22768453..22773021, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene prenylated RAB acceptor 1.G2 Neighboring gene hapless protein Neighboring gene ncRNA Neighboring gene Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase Neighboring gene WRKY DNA-binding protein 2 Neighboring gene COP9 signalosome subunit 6A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_125008.5
    NM_203212.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hapless 8
    NP_200436.1
    • HAPLESS 8 (HAP8); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_974941.1
    • HAPLESS 8 (HAP8); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22768453..22773021 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_203212.2 → NP_974941.1  hapless 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974941.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UN52, A0A5S9YEI3, Q9FH14

    2. NM_125008.5 → NP_200436.1  hapless 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200436.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UN52, A0A5S9YEI3, Q9FH14
    Nucleotide Protein
    Heading Accession and Version

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