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    kinase family with leucine-rich repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832662, updated on 18-Sep-2024

    Summary

    Official Full Name
    kinase family with leucine-rich repeat domain-containing protein
    Primary source
    TAIR:AT5G25930
    Locus tag
    AT5G25930
    See related
    Araport:AT5G25930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18A17.4
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (9050660..9054143)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene early nodulin-like protein Neighboring gene ncRNA Neighboring gene AslB, putative (DUF239)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_122494.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    kinase family with leucine-rich repeat domain-containing protein
    NP_197965.1
    • Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      9050660..9054143
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122494.4NP_197965.1  kinase family with leucine-rich repeat domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197965.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UQ46, A0A5S9Y7D6, A0A654G460, Q9XGZ2
      Conserved Domains (4) summary
      PLN00113
      Location:30977
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00031
      Location:428439
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:113137
      LRR_RI; leucine-rich repeat [structural motif]
      cl21453
      Location:691964
      PKc_like; Protein Kinases, catalytic domain