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    ECA1 gametogenesis related family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 5007775, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ECA1 gametogenesis related family protein
    Primary source
    TAIR:AT1G44224
    Locus tag
    AT1G44224
    See related
    Araport:AT1G44224
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Encodes a ECA1 gametogenesis related family protein
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (16820929..16821823, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene Aldolase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084209.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ECA1 gametogenesis related family protein
    NP_001077678.1
    • ECA1 gametogenesis related family protein; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G50570.1); Has 7891 Blast hits to 2246 proteins in 385 species: Archae - 0; Bacteria - 2651; Metazoa - 2792; Fungi - 510; Plants - 409; Viruses - 97; Other Eukaryotes - 1432 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16820929..16821823 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084209.2 → NP_001077678.1  ECA1 gametogenesis related family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077678.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WJF3, Q570Y0
      Conserved Domains (1) summary
      PHA02030
      Location:71 → 145
      PHA02030; hypothetical protein
    Nucleotide Protein
    Heading Accession and Version

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