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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086026.1 Reference GRCr8
- Range
-
89427834..89545886 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_039082533.2 → XP_038938461.1 collagen alpha-1(XII) chain isoform X1
- UniProtKB/TrEMBL
- A0A0G2KAJ7, A0A8I5ZRE6
- Conserved Domains (6) summary
-
- smart00060
Location:1474 → 1548
- FN3; Fibronectin type 3 domain
- smart00210
Location:2521 → 2713
- TSPN; Thrombospondin N-terminal -like domains
- cd00063
Location:724 → 805
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd01482
Location:1198 → 1361
- vWA_collagen_alphaI-XII-like; Collagen: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different ...
- pfam00041
Location:1387 → 1465
- fn3; Fibronectin type III domain
- pfam01391
Location:2766 → 2892
- Collagen; Collagen triple helix repeat (20 copies)
-
XM_039082534.2 → XP_038938462.1 collagen alpha-1(XII) chain isoform X2
- UniProtKB/TrEMBL
-
A6I1L5
- Conserved Domains (6) summary
-
- smart00060
Location:310 → 384
- FN3; Fibronectin type 3 domain
- smart00210
Location:1357 → 1549
- TSPN; Thrombospondin N-terminal -like domains
- cd00063
Location:955 → 1034
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd01482
Location:34 → 197
- vWA_collagen_alphaI-XII-like; Collagen: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different ...
- pfam00041
Location:223 → 301
- fn3; Fibronectin type III domain
- pfam01391
Location:1706 → 1734
- Collagen; Collagen triple helix repeat (20 copies)
-
XM_063264976.1 → XP_063121046.1 collagen alpha-1(XII) chain isoform X3
- UniProtKB/TrEMBL
-
A6I1L5