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    ELMO/CED-12 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819086, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ELMO/CED-12 family protein
    Primary source
    TAIR:AT2G44770
    Locus tag
    AT2G44770
    See related
    Araport:AT2G44770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16B22.26
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    10
    Sequence:
    Chromosome: 2; NC_003071.7 (18457322..18460383)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene WRKY family transcription factor Neighboring gene thiamine pyrophosphokinase 2 Neighboring gene dihydroorotate dehydrogenase (DUF3598) Neighboring gene miscRNA Neighboring gene uclacyanin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Members of the ELMOD protein family specify formation of distinct aperture domains on the Arabidopsis pollen surface. Zhou Y, et al. Elife, 2021 Sep 30. PMID 34591014, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_130042.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ELMO/CED-12 family protein
    NP_566027.1
    • ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT3G60260.4); Has 866 Blast hits to 866 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 498; Fungi - 61; Plants - 182; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18457322..18460383
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130042.1 → NP_566027.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566027.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNG3, O80516, Q940L9
      Conserved Domains (1) summary
      pfam04727
      Location:70 → 236
      ELMO_CED12; ELMO/CED-12 family
    Nucleotide Protein
    Heading Accession and Version

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