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    sugar phosphate exchanger, putative (DUF506) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816595, updated on 18-Sep-2024

    Summary

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    Official Full Name
    sugar phosphate exchanger, putative (DUF506)
    Primary source
    TAIR:AT2G20670
    Locus tag
    AT2G20670
    See related
    Araport:AT2G20670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23N11.1
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (8911860..8913747, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene protein kinase and Mad3-BUB1-I domain-containing protein Neighboring gene RING/U-box superfamily protein Neighboring gene ralf-like 14 Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene lumazine-binding family protein Neighboring gene LORELEI-LIKE-GPI ANCHORED PROTEIN 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel calmodulin-interacting Domain of Unknown Function 506 protein represses root hair elongation in Arabidopsis. Ying S, et al. Plant Cell Environ, 2022 Jun. PMID 35312071, Free PMC Article
    2. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
    3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_127631.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to nutrient levels IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    sugar phosphate exchanger, putative (DUF506)
    NP_565481.1
    • Protein of unknown function (DUF506); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G32480.1); Has 375 Blast hits to 373 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 373; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8911860..8913747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127631.3 → NP_565481.1  sugar phosphate exchanger, putative (DUF506) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565481.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VW62, A0A654EUJ9, Q9SIU5
      Conserved Domains (1) summary
      pfam04720
      Location:24 → 247
      PDDEXK_6; PDDEXK-like family of unknown function
    Nucleotide Protein
    Heading Accession and Version

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