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    C3HC zinc finger-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841317, updated on 18-Sep-2024

    Summary

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    Official Full Name
    C3HC zinc finger-like protein
    Primary source
    TAIR:AT1G48950
    Locus tag
    AT1G48950
    See related
    Araport:AT1G48950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F27K7.14
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (18106860..18110386)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nucleolin like 1 Neighboring gene glycosyl hydrolase 9C1 Neighboring gene early nodulin-like protein 6 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_103788.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    C3HC zinc finger-like protein
    NP_175325.2
    • C3HC zinc finger-like; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC-like (InterPro:IPR012935); BEST Arabidopsis thaliana protein match is: IAP-like protein 1 (TAIR:AT1G17210.1); Has 249 Blast hits to 238 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 80; Plants - 75; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      18106860..18110386
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103788.3 → NP_175325.2  C3HC zinc finger-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175325.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCC7, A0A654EGQ9, F4I045
      Conserved Domains (1) summary
      pfam07967
      Location:81 → 209
      zf-C3HC; C3HC zinc finger-like
    Nucleotide Protein
    Heading Accession and Version

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