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    CAT7 cationic amino acid transporter 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820229, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CAT7
    Official Full Name
    cationic amino acid transporter 7
    Primary source
    TAIR:AT3G10600
    Locus tag
    AT3G10600
    See related
    Araport:AT3G10600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cationic amino acid transporter 7
    Summary
    Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.
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    Genomic context

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    See CAT7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (3313953..3317340)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Duplicated homeodomain-like superfamily protein Neighboring gene Duplicated homeodomain-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene Ribosomal S17 family protein Neighboring gene nudix hydrolase homolog 26

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables basic amino acid transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cationic amino acid transporter 7
    NP_187671.1
    • cationic amino acid transporter 7 (CAT7); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 6 (TAIR:AT5G04770.1); Has 33338 Blast hits to 33265 proteins in 2295 species: Archae - 501; Bacteria - 26895; Metazoa - 1960; Fungi - 2417; Plants - 365; Viruses - 0; Other Eukaryotes - 1200 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3313953..3317340
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111896.2 → NP_187671.1  cationic amino acid transporter 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187671.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SQZ0
      UniProtKB/TrEMBL
      A0A5S9XB31, A0A7G2ENX4
      Conserved Domains (1) summary
      TIGR00906
      Location:50 → 561
      2A0303; cationic amino acid transport permease

    2. NM_001337885.1 → NP_001325725.1  cationic amino acid transporter 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LM42
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SQZ0.1

    Gene LinkOut

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