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    cellulose synthase, putative (DUF1644) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822072, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cellulose synthase, putative (DUF1644)
    Primary source
    TAIR:AT3G24740
    Locus tag
    AT3G24740
    See related
    Araport:AT3G24740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (9031078..9033850)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene NADPH-dependent diflavin oxidoreductase Neighboring gene kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein Neighboring gene mRNA splicing factor, thioredoxin-like U5 snRNP Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001035684.3
    NM_001338704.1
    NM_001338705.1
    NM_113386.7

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cellulose synthase, putative (DUF1644)
    NP_001030761.1
    • Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT1G68140.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_189118.1
    • Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT1G68140.3); Has 253 Blast hits to 248 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9031078..9033850
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338702.1 → NP_001325608.1  cellulose synthase, putative (DUF1644) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFB8, A0A654FBP6, Q9LRY5
      Conserved Domains (1) summary
      pfam07800
      Location:22 → 219
      DUF1644; Protein of unknown function (DUF1644)

    2. NM_001338703.1 → NP_001325611.1  cellulose synthase, putative (DUF1644) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFB8, A0A654FBP6, Q9LRY5
      Conserved Domains (1) summary
      pfam07800
      Location:22 → 219
      DUF1644; Protein of unknown function (DUF1644)

    3. NM_113386.7 → NP_189118.1  cellulose synthase, putative (DUF1644) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189118.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFB8, A0A654FBP6, Q9LRY5
      Conserved Domains (1) summary
      pfam07800
      Location:22 → 219
      DUF1644; Protein of unknown function (DUF1644)

    4. NM_001035684.3 → NP_001030761.1  cellulose synthase, putative (DUF1644) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030761.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFB8, A0A654FBP6, Q9LRY5
      Conserved Domains (1) summary
      pfam07800
      Location:22 → 219
      DUF1644; Protein of unknown function (DUF1644)

    5. NM_001338704.1 → NP_001325610.1  cellulose synthase, putative (DUF1644) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFB8, A0A654FBP6, Q9LRY5
      Conserved Domains (1) summary
      pfam07800
      Location:22 → 219
      DUF1644; Protein of unknown function (DUF1644)

    6. NM_001338705.1 → NP_001325609.1  cellulose synthase, putative (DUF1644) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFB8, A0A654FBP6, Q9LRY5
      Conserved Domains (1) summary
      pfam07800
      Location:22 → 219
      DUF1644; Protein of unknown function (DUF1644)
    Nucleotide Protein
    Heading Accession and Version

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