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    ULP1B UB-like protease 1B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828036, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ULP1B
    Official Full Name
    UB-like protease 1B
    Primary source
    TAIR:AT4G00690
    Locus tag
    AT4G00690
    See related
    Araport:AT4G00690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6N23.7; F6N23_7; UB-like protease 1B
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    Genomic context

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    See ULP1B in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (281132..283612)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RNAhelicase-like 8 Neighboring gene Remorin family protein Neighboring gene actin depolymerizing factor 8 Neighboring gene ncRNA Neighboring gene Spc97/Spc98 family of spindle pole body (SBP) component Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Neighboring gene BR-signaling kinase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001340261.1

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    UB-like protease 1B
    NP_001319834.1
    • UB-like protease 1B (ULP1B); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G15880.1); Has 1373 Blast hits to 1372 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 603; Fungi - 267; Plants - 349; Viruses - 5; Other Eukaryotes - 149 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      281132..283612
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340261.1 → NP_001319834.1  UB-like protease 1B [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JHF6, O65278
      UniProtKB/TrEMBL
      A0A5S9XNN2, A0A654FKM6
      Conserved Domains (1) summary
      cl23802
      Location:105 → 341
      Peptidase_C48; Ulp1 protease family, C-terminal catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O65278.2

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