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    fringe-like protein (DUF604) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828447, updated on 18-Sep-2024

    Summary

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    Official Full Name
    fringe-like protein (DUF604)
    Primary source
    TAIR:AT4G23490
    Locus tag
    AT4G23490
    See related
    Araport:AT4G23490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16G20.2
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (12251334..12254275, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Disease resistance protein (TIR-NBS class) Neighboring gene RING/U-box superfamily protein Neighboring gene Adaptin family protein Neighboring gene PLAC8 family protein Neighboring gene uncharacterized protein Neighboring gene SPIRAL1-like5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_118478.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    fringe-like protein (DUF604)
    NP_567683.1
    • Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G11350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12251334..12254275 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118478.5 → NP_567683.1  fringe-like protein (DUF604) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567683.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FS62, Q8H0S2, Q941F0
      Conserved Domains (2) summary
      pfam04646
      Location:246 → 499
      DUF604; Protein of unknown function, DUF604
      cl21608
      Location:109 → 311
      Galactosyl_T; Galactosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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