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    Fatty acid hydroxylase superfamily [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818347, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Fatty acid hydroxylase superfamily
    Primary source
    TAIR:AT2G37700
    Locus tag
    AT2G37700
    See related
    Araport:AT2G37700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13M22.20; F13M22_20
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    10
    Sequence:
    Chromosome: 2; NC_003071.7 (15810520..15814218, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene far-red elongated hypocotyl 1 Neighboring gene glucose-induced degradation-like protein Neighboring gene phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase Neighboring gene receptor lectin kinase Neighboring gene TRICHOME BIREFRINGENCE-LIKE 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001124992.2
    NM_129326.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Fatty acid hydroxylase superfamily
    NP_001118464.1
    • Fatty acid hydroxylase superfamily; FUNCTIONS IN: oxidoreductase activity, iron ion binding, catalytic activity; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_181306.3
    • Fatty acid hydroxylase superfamily; FUNCTIONS IN: oxidoreductase activity, iron ion binding, catalytic activity; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15810520..15814218 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336672.1 → NP_001325049.1  Fatty acid hydroxylase superfamily [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VTW4, A0A1P8B1Z3

    2. NM_001336671.1 → NP_001325048.1  Fatty acid hydroxylase superfamily [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VTW4, A0A1P8B1Z1, A0A654F151
      Conserved Domains (1) summary
      PLN02869
      Location:1 → 619
      PLN02869; fatty aldehyde decarbonylase

    3. NM_129326.3 → NP_181306.3  Fatty acid hydroxylase superfamily [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181306.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H5B0, F4IR05, O80938
      UniProtKB/TrEMBL
      A0A178VTW4
      Conserved Domains (3) summary
      PLN02869
      Location:1 → 610
      PLN02869; fatty aldehyde decarbonylase
      pfam04116
      Location:128 → 268
      FA_hydroxylase; Fatty acid hydroxylase superfamily
      pfam12076
      Location:448 → 605
      Wax2_C; WAX2 C-terminal domain

    4. NM_001124992.2 → NP_001118464.1  Fatty acid hydroxylase superfamily [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118464.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IR05
      Conserved Domains (3) summary
      PLN02869
      Location:1 → 475
      PLN02869; fatty aldehyde decarbonylase
      pfam04116
      Location:128 → 268
      FA_hydroxylase; Fatty acid hydroxylase superfamily
      pfam12076
      Location:448 → 472
      Wax2_C; WAX2 C-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4IR05.1

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