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    CPT cis-prenyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816873, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CPT
    Official Full Name
    cis-prenyltransferase
    Primary source
    TAIR:AT2G23410
    Locus tag
    AT2G23410
    See related
    Araport:AT2G23410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ACPT; AtcPT3; cis-prenyltransferase; cis-prenyltransferase 3; cPT3
    Summary
    encodes cis-prenyltransferase
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    Genomic context

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    See CPT in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (9966127..9967788, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SET domain-containing protein Neighboring gene acyl-CoA Neighboring gene Undecaprenyl pyrophosphate synthetase family protein Neighboring gene miscRNA Neighboring gene nicotinate phosphoribosyltransferase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Long-Chain Polyisoprenoids Are Synthesized by AtCPT1 in Arabidopsis thaliana. Surowiecki P, et al. Molecules, 2019 Jul 31. PMID 31370240, Free PMC Article
    2. Dolichol biosynthesis and its effects on the unfolded protein response and abiotic stress resistance in Arabidopsis. Zhang H, et al. Plant Cell, 2008 Jul. PMID 18612099, Free PMC Article
    3. Characterization of dehydrodolichyl diphosphate synthase of Arabidopsis thaliana, a key enzyme in dolichol biosynthesis. Cunillera N, et al. FEBS Lett, 2000 Jul 21. PMID 10908715
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_127905.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables dehydrodolichyl diphosphate synthase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within dolichol biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within dolichol biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cis-prenyltransferase
    NP_565551.1
    • cis-prenyltransferase (CPT); FUNCTIONS IN: dehydrodolichyl diphosphate synthase activity; INVOLVED IN: dolichol biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G58780.1); Has 9228 Blast hits to 9165 proteins in 2782 species: Archae - 287; Bacteria - 5302; Metazoa - 204; Fungi - 266; Plants - 216; Viruses - 0; Other Eukaryotes - 2953 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9966127..9967788 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127905.4 → NP_565551.1  cis-prenyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565551.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80458, Q9SEB8
      UniProtKB/TrEMBL
      A0A178VP94, A0A5S9X0R1, A0A654EVE6
      Conserved Domains (1) summary
      cd00475
      Location:73 → 294
      Cis_IPPS; Cis (Z)-Isoprenyl Diphosphate Synthases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80458.2

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