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    transmembrane protein, putative (DUF1985) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815288, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transmembrane protein, putative (DUF1985)
    Primary source
    TAIR:AT2G07190
    Locus tag
    AT2G07190
    See related
    Araport:AT2G07190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T25N22.15; T25N22_15
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (2987367..2988945)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene pseudo Neighboring gene Cysteine proteinases superfamily protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein, putative (DUF1985)
    NP_178732.1
    • CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1985 (InterPro:IPR015410); BEST Arabidopsis thaliana protein match is: cysteine-type peptidases;cysteine-type peptidases (TAIR:AT2G07240.1); Has 165 Blast hits to 165 proteins in 27 species: Archae - 0; Bacteria - 6; Metazoa - 6; Fungi - 2; Plants - 127; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      2987367..2988945
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126691.1 → NP_178732.1  transmembrane protein, putative (DUF1985) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178732.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ETW4, Q9ZV75
      Conserved Domains (1) summary
      pfam09331
      Location:13 → 97
      DUF1985; Domain of unknown function (DUF1985)
    Nucleotide Protein
    Heading Accession and Version

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